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Medizinische Universität Graz

MEDICAL RESEARCH ACADEMY GRAZ
16s rRNA MICROBIOME DATA ANALYSIS IN GALAXY

 

16s rRNA microbiome profiling is very popular method for quantitative bacterial characterization of different samples. Tools for the data analysis are already good established and they can be used in the web-based Galaxy platform. This workshop is intended to show full pipeline with all necessary steps of analyzing 16s rRNA microbiome data in Galaxy (preprocessing and QC, generating OTU table, alpha and beta diversity and groups comparison). The course participants will learn the tools and their parameters to properly analyze their own dataset. Upon successful completion of this course, they will be familiar with:

  • Upload Microbiome data in Galaxy,
  • Data preprocessing
  • Alpha and beta diversity analysis and visualization
  • Accessing and reading the generated results
  • Groups comparison

 

Teaching and learning method: Interactive hands-on training

Requirements: Basics of working with Galaxy platform

 

Hardware and Software: Please take a laptop with you. You can log into Galaxy with your MUG-account. 

For registration please fill in the registration form (Link or registration button on the left side)

 

 

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